TARDBP

Gene summary Variants Phenotype Publications

Gene summary

Gene TARDBP
Gene name TAR DNA binding protein
Number variants ALSoD 69
Number people with mutation ALSoD 108
Number of papers ALSoD 38
Chromosomal location 1p36.22
Protein TAR DNA-binding protein 43
Discovery method Linkage analysis
Hg19 start-end 11072401-11086477
Hg38 start-end 11012344-11026420
Category

Definitive ALS gene

Evidence summary

To be drafted

Review references To be added

Variants in ALSoD

Mnemonic Chromosome Position hg19 HGVS Pubmed links # publications # patients
A315A 1 11082411 NM_007375.4:c.945G>A 19864663 1 0
A315E 1 11082410 NM_007375.3:c.944C>A 21956716 1 0
A315T 1 11082409 NM_007375.3:c.943G>A 20577002 18288693 18372902 3 5
A321G 1 11082428 NM_007375.3:c.962C>G 19864663 1 2
A321V 1 11082428 NM_007375.3:c.962C>T 19760257 1 1
A366A 1 11082564 NM_007375.3:c.1098C>G 19411082 20082726 2 0
A382P 1 11082610 NM_007375.3:c.1144G>C 18931000 1 1
A382T 1 11082610 NM_007375.3:c.1144G>A 20577002 20959352 19224587 19236453 18372902 5 19
A66A 1 11073982 NM_007375.3:c.198T>C 19864663 18931000 18545701 3 2
A90V 1 11076931 NM_007375.3:c.269C>T 19236453 18545701 19760257 18309045 18505686 5 0
c.-12-54G>A 1 11073719 NM_007375.3:c.-12-54G>A 19760257 1 0
c.-66G>T 1 11072747 NM_007375.3:c.-66G>T 19760257 1 0
c.-69C>T 1 11072744 NM_007375.3:c.-69C>T 19760257 1 0
c.403-80G>A 1 11078710 NM_007375.3:c.403-80G>A 19760257 1 0
c.411A>G 1 11078798 NM_007375.3:c.411A>G 19760257 1 0
c.543+112C>A 1 11079042 NM_007375.3:c.543+112C>A 19760257 1 0
c.81G>A 1 11073865 NM_007375.3:c.81G>A 19760257 1 0
D169G 1 11078893 NM_007375.3:c.506A>G 18372902 1 1
D65E 18545701 1 0
G287S 1 11082325 NM_007375.3:c.859G>A 19224587 18372902 19760257 3 4
G290A 1 11082335 NM_007375.3:c.869G>C 18396105 1 2
G294A 1 11082347 NM_007375.3:c.881G>C 18309045 1 1
G294V 1 11082347 NM_007375.3:c.881G>T 20959352 19224587 19236453 19864664 4 7
G295C 1 11082349 NM_007375.4:c.883G>T 23155438 1 0
G295R 1 11082349 NM_007375.3:c.883G>C 19224587 1 1
G295S 1 11082349 NM_007375.3:c.883G>A 20577002 19350673 19224587 19236453 4 6
G298S 1 11082358 NM_007375.3:c.892G>A 18396105 1 3
G335D 1 11082470 NM_007375.3:c.1004G>A 19224587 1 1
G348C 1 11082508 NM_007375.3:c.1042G>T 20577002 18931000 19236453 18372902 18779421 5 8
G348V 1 11082509 NM_007375.3:c.1043G>T 19760257 1 3
G357R 1 11082535 NM_007375.4:c.1069G>C 22456481 1 0
G357S 1 11082535 NM_007375.4:c.1069G>A 20675015 28160950 2 0
G368S 1 11082568 NM_007375.4:c.1102G>A 21120508 22550220 2 0
G376D 1 11082593 NM_007375.4:c.1127G>A 20959352 1 1
G384R 1 11082616 NM_007375.3:c.1150G>C 20577002 1 0
G40G 1 11073904 NM_007375.3:c.120G>A 20082726 1 0
I383T 1 11082614 NM_007375.4:c.1148T>C 23155438 1 0
I383V 1 11082613 NM_007375.3:c.1147A>G 23155438 18802454 2 3
M311V 1 11082397 NM_007375.3:c.931A>G 19228676 1 1
M337V 1 11082475 NM_007375.3:c.1009A>G 20472325 19224587 19760257 18802454 18309045 5 9
M359V 1 11082541 NM_007375.4:c.1075A>G 20645878 1 1
N267S 1 11082266 NM_007375.3:c.800A>G 19224587 1 1
N345K 1 11082501 NM_007375.3:c.1035C>A 18802454 1 1
N352N 18545701 1 0
N352S 1 11082521 NM_007375.3:c.1055A>G 23155438 19411082 18779421 3 3
N352T 1 11082521 NM_007375.4:c.1055A>C 21438137 1 0
N378D 1 11082598 NM_007375.3:c.1132A>G 20472325 1 0
N378S 1 11082599 NM_007375.4:c.1133A>G 20708823 1 0
N378_A382del 1 11082597 NM_007375.4:c.1133_1147del 29650794 1 0
N390D 1 11082634 NM_007375.3:c.1168A>G 18372902 1 1
N390S 1 11082635 NM_007375.3:c.1169A>G 18372902 1 1
P225P 18545701 1 0
P363A 1 11082553 NM_007375.3:c.1087C>G 18931000 1 1
Q303H 1 11082375 NM_007375.4:c.909A>C 22722621 1 0
Q331K 1 11082457 NM_007375.3:c.991C>A 18309045 1 1
Q343R 1 11082494 NM_007375.3:c.1028A>G 18438952 1 3
R361S 1 11082549 NM_007375.3:c.1083G>T 18372902 1 1
R361T 1 11082548 NM_007375.4:c.1082G>C 22456481 1 0
S104S 1 11076974 NM_007375.3:c.312C>T 19760257 1 0
S292N 1 11082341 NM_007375.3:c.875G>A 20082726 22575358 2 5
S317T 1 11082416 NM_007375.4:c.950G>C 26601740 1 0
S332N 1 11082461 NM_007375.3:c.995G>A 19224587 1 1
S375G 1 11082589 NM_007375.4:c.1123A>G 25382069 1 0
S379C 1 11082602 NM_007375.3:c.1136C>G 19224587 1 1
S379P 1 11082601 NM_007375.3:c.1135T>C 19224587 1 1
S387delinsTNP 1 11082624 NM_007375.4:c.1158_1159delATinsCACCAACC 22424122 1 0
S393L 1 11082644 NM_007375.3:c.1178C>T 19224587 1 4
W385G 1 11082619 NM_007375.3:c.1153T>G 20577002 1 0
Y374X 1 11082588 NM_007375.3:c.1122T>A 18931000 1 1

Phenotype

Papers in ALSoD

Pubmed ID First author Year Title
19864663 Bäumer 2009 TARDBP in amyotrophic lateral sclerosis: identification of a novel variant but absence of copy number variation
19350673 Benajiba 2009 TARDBP mutations in motoneuron disease with frontotemporal lobar degeneration
20645878 Borroni 2014 TARDBP mutations in frontotemporal lobar degeneration: frequency, clinical features, and disease course
25382069 Cady 2015 Amyotrophic lateral sclerosis onset is inuenced by the burden of rare variants in known amyotrophic lateral sclerosis genes
22456481 Chiang 2012 Novel TARDBP mutations in Nordic ALS patients
22550220 Chio 2012 ALS/FTD phenotype in two Sardinian families carrying both C9ORF72 and TARDBP mutations
20959352 Conforti 2011 TARDBP gene mutations in south Italian patients with amyotrophic lateral sclerosis
19224587 Corrado 2009 High frequency of TARDBP gene mutations in Italian patients with amyotrophic lateral sclerosis
18931000 Daoud 2008 Contribution of TARDBP mutations to sporadic amyotrophic lateral sclerosis
21120508 De 2011 Cytoplasmic accumulation of TDP-43 in circulating lymphomonocytes ofALS patients with and without TARDBP mutations
19236453 Del Bo 2009 TARDBP (TDP-43) sequence analysis in patients with familial and sporadic ALS: identification of two novel mutations
21956716 Fujita 2011 Different clinical and neuropathologic phenotypes of familial ALS with A315E TARDBP mutation
18288693 Gitcho 2008 TDP-43 A315T mutation in familial motor neuron disease
18545701 Guerreiro 2008 TDP-43 is not a common cause of sporadic amyotrophic lateral sclerosis
20708823 Huang 2012 TARDBP gene mutations among Chinese patients with sporadic amyotrophic lateral sclerosis
20675015 Iida 2012 Large scale screening of TARDBP mutation in amyotrophic lateral sclerosis in Japanese
18372902 Kabashi 2008 TARDBP mutations in individuals with sporadic and familial amyotrophic lateral sclerosis
19411082 Kamada 2009 Screening for TARDBP mutations in Japanese familial amyotrophic lateral sclerosis
26601740 Kim 2016 Identification of mutations in Korean patients with amyotrophic lateral sclerosis using multigene panel testing
19760257 Kirby 2009 Broad clinical phenotypes associated with TAR-DNA binding protein (TARDBP) mutations in amyotrophic lateral sclerosis
18779421 Kuhnlein 2008 Two German kindreds with familial amyotrophic lateral sclerosis due to TARDBP mutations
22722621 Lattante 2012 Contribution of major amyotrophic lateral sclerosis genes to the etiology of sporadic disease
19228676 Lemmens 2009 TDP-43 M311V mutation in familial amyotrophic lateral sclerosis
20577002 Millecamps 2010 SOD1, ANG, VAPB, TARDBP, and FUS mutations in familial amyotrophic lateral sclerosis: genotype-phenotype correlations
29650794 Muller 2018 Comprehensive analysis of the mutation spectrum in 301 German ALS families
28160950 Nishiyama 2017 Comprehensive targeted next-generation sequencing in Japanese familial amyotrophic lateral sclerosis
18802454 Rutherford 2008 Novel mutations in TARDBP (TDP-43) in patients with familial amyotrophic lateral sclerosis
22424122 Solski 2012 A novel TARDBP insertion/deletion mutation in theA0flail arm variant of amyotrophic lateral sclerosis
18309045 Sreedharan 2008 TDP-43 mutations in familial and sporadic amyotrophic lateral sclerosis
21438137 Ticozzi 2011 Mutational analysis reveals the FUS homolog TAF15 as a candidate gene for familial amyotrophic lateral sclerosis
20472325 Tsai 2010 FUS, TARDBP, and SOD1 mutations in a Taiwanese cohort with familial ALS
23155438 van Blitterswijk 2012 Genetic overlap between apparently sporadic motor neuron diseases
18396105 Van Deerlin 2008 TARDBP mutations in amyotrophic lateral sclerosis with TDP-43 neuropathology: a genetic and histopathological analysis
19864664 Williams 2009 A novel TARDBP mutation in an Australian amyotrophic lateral sclerosis kindred
18505686 Winton 2008 A90V TDP-43 variant results in the aberrant localization of TDP-43 in vitro
20082726 Xiong 2010 Association between novel TARDBP mutations and Chinese patients with amyotrophic lateral sclerosis
18438952 Yokoseki 2008 TDP-43 mutation in familial amyotrophic lateral sclerosis
22575358 Zou 2012 Screening of the TARDBP gene in familial and sporadic amyotrophic lateral sclerosis patients of Chinese origin